Publications

Total of 31 published or in review; 11 first-author
* indicates mentored undergraduate student

ResearchGate | ORCID | Google Scholar

In review

Lewis, A. S. L., D. Mercado-Bettin, and C. C. Carey. Ecological memory of spring air temperature drives summer water quality dynamics in temperate lakes. In revision at Ecology Letters.

Lewis, A. S. L., D. C. Richardson, D. W. Howard, C. C. Carey, Y. Amitai, S. Bansal, E. de Eyto, H-P Grossart, K. K. Hoffman, R. Hovel, L. Knoll, B. M. Kraemer, I. Oleksy, M. Schmid, R. Schwefel, D. Straile, X. Sun, G. A. Weyhenmeyer, W. M. Woelmer, S. Wollrab, P. Znachor. How should we analyze seasons and seasonality in lakes? In review at Limnology and Oceanography Letters.

Lewis, A. S. L., J. R. Holmquist, A. N. Al-Haj, Z. N. Read, R. L. Rich, J. P. Megonigal, and G. L. Noyce. Warming decreases the predictability of coastal wetland methane emissions. In review at Ecosphere.

Colton, M., T. Fanara, S. Babin, A. S. L. Lewis, M. Dietze, C. Brown, M. Cotnoir, A. Caldas, K. Boyd. Ecological Forecasting for Readiness, Resilience, and Response. In review at Bulletin of the American Meteorological Society.

Rabaey, J. S., A. S. L. Lewis, K. Attermeyer, P. Aurich, S. Bansal, M. Bartosiewicz, B. L. Bertolet, I. Bussmann, S. B. Cadieux, E. Calamita, C. Capelli, C. C. Carey, C. Cillero, F. Clayer, S. L. D’Ambrosio, T. A. Davidson, B. R. Deemer, B. A. Denfeld, W. Eckert, C. Esposito, P. Ford, A. Gorsky, N. A. Griffiths, H-P. Grossart, D. P. Hamilton, M. A. Holgerson, B. J. Huser, T. Iwata, J. Jansen, S. Jones, S. Juutinen, P. Kortelainen, M. Koschorreck, T. Kragh, A. Laas, T. Larmola, S. Läubli, I. Laurion, M. F. Lehmann, L. Liu, P. J. Martikainen, A. Matoušů, S. A. McCord, J. J. Montes-Pérez, D. Nizzoli, C. Ordóñez, M. Peacock, R. M. Pilla, V. Preskienis, J. Pu, T. Riis, T. Saarela, A. B. Santoso, C. J. Schubert, A. Sepulveda-Jauregui, B. S. Sherman, J. S. Sø, K. J. Stenehjem, K. J. Stenehjem, K. E. D. Strock, K. Tsuchiya, K. Wendt-Potthoff, G. A. Weyhenmeyer, P. Znachor, and J. Zopfi. Carbon dioxide and methane depth-profile concentrations in 544 lakes, ponds, and reservoirs worldwide. In review at Scientific Data.

Holmquist, J. R., A. R. Carr, and A. S. L. Lewis. Continuous Salinity Mapping for Coastal Wetlands in the United States. In revision at Remote Sensing of the Environment.

Sjodin, A., G. Stokes, C. Gallagher, M. Javadian, A. S. L. Lewis, C. Schreiner, L. Super, B. Tuschhoff, A. Willson, M. C. Dietze, J. MacLachlan, J. Peters. Toward a standard lexicon for ecological forecasting. In revision at Frontiers in Ecology and the Environment.

Wood, C. E., M. E. Schreiber, C. E. Bauer, A. Breef-Pilz, A. S. L. Lewis, N. W. Hammond, R. P. McClure, M. F. Verne, C. C. Carey. Preemptive activation of hypolimnetic oxygenation improves control of Fe and Mn in drinking water reservoirs. In revision at Water Research.

2025

Olsson, F. E., C. C. Carey, G. Harrison, R. Ladwig, M. F. Lapeyrolerie, A. S. L. Lewis, M. E. Lofton, F. Montealegre-Mora, J. S. Rabaey, C. J. Robbins, X. Yang, R. Q. Thomas. 2025. What can we learn from 100,000 freshwater forecasts? A synthesis from the NEON Ecological Forecasting Challenge. Ecological Applications. https://doi.org/10.1002/eap.70004

2024

Lewis, A. S. L., M. P. Lau, S. F. Jane, K. C. Rose, Y. Be’eri-Shlevin, S. H. Burnet, F. Clayer, H. Feuchtmayr, H. P. Grossart, D. W. Howard, H. Mariash, J. Delgado Martin, R. L. North, I. Oleksy, R. M. Pilla, A. P. Smagula, R. Sommaruga, S. E. Steiner, P. Verburg, D. Wain, G. A. Weyhenmeyer, C. C. Carey. 2024. Anoxia Begets Anoxia: a positive feedback to the deoxygenation of temperate lakes. Global Change Biology. 30(1), e17046. http://doi.org/10.1111/gcb.17046

• Reported in 36 news stories from 34 outlets (Altmetric)

Lewis, A. S. L., A. Breef-Pilz, D. W. Howard, M. E. Lofton, F. Olsson, H. L. Wander, C. E. Wood, M. E. Schreiber, C. C. Carey. 2024. Reservoir Drawdown Highlights the Emergent Effects of Water Level Change on Reservoir Physics, Chemistry, and Biology. JGR Biogeosciences. 129, e2023JG007780. https://doi.org/10.1029/2023JG007780

Mesman, J. P., C. C. Barbosa, A. S. L. Lewis, F. E. Olsson, S. Calhoun-Grosch, H.-P. Grossart, R. Ladwig, R. S. La Fuente, K. Münzner, L. G. T. Nkwalale, R. M. Pilla, K. Suresh and D. J. Wain. 2024. Challenges of Open Data in aquatic sciences: issues faced by data users and data providers. Frontiers in Environmental Science. https://doi.org/10.3389/fenvs.2024.1497105

Howard, D. W., J. A. Brentrup, D. C. Richardson, A. S. L. Lewis, F. E. Olsson, and C. C. Carey. Variability in ice cover does not affect annual metabolism estimates in a small eutrophic reservoir. JGR Biogeosciences , 129, e2024JG008057. https://doi.org/10.1029/2024JG008057

Malmborg, C. A., A. M. Willson, L. M. Bradley, M. A. Beatty, D. H. Klinges, G. Koren, A. S. L. Lewis, K. Oshinubi, and W. M. Woelmer. Defining Model Complexity: An Ecological Perspective. Meteorological Applications, 31(3), e2202. https://doi.org/10.1002/met.2202

Wander, H. L., A. S. L. Lewis, D. W. Howard, M. E. Lofton, W. M. Woelmer, B. L. Brown, and C. C. Carey. 2024. Zooplankton community structure and diel migration patterns vary over hours, days, and years in the pelagic and littoral zone of a eutrophic reservoir. Journal of Plankton Research, fbae017. https://doi.org/10.1093/plankt/fbae017

Man, X., C. Lei, K. A. Bierlein, L. D. Bryant. A. S. L. Lewis, C. C. Carey, J. C. Little. 2024. Computationally characterizing the diffusive boundary layer in lakes and reservoirs. Journal of Soils and Sediments. https://doi.org/10.1007/s11368-024-03767-0

2023

Lewis, A. S. L., C. R. Rollinson, A. J. Allyn, J. Ashander, S. Brodie, C. B. Brookson, E. Collins, M. C. Dietze, A. S. Gallinat, N. Juvigny-Khenafou, G. Koren, D. J. McGlinn, J. A. Peters, N. R. Record, C. J. Robbins, J. Tonkin, and G. M. Wardle. 2023. The power of forecasts to advance ecological theory. Methods in Ecology and Evolution. 14(3), 746–756. https://doi.org/10.1111/2041-210X.13955

Lewis, A. S. L., M. E. Schreiber, B. R. Niederlehner, A. Das*, N. W. Hammond, M. E. Lofton, H. L. Wander, C. C. Carey. 2023. Effects of Hypoxia on Coupled Iron and Carbon Cycling Differ by Timescale in Two Freshwater Reservoirs. Journal of Geophysical Research: Biogeosciences. 128(1), e2022JG007071. https://doi.org/10.1029/2022JG007071

Lewis, A. S. L., D. W. Howard, G. Koren, C. Kowalski, J. McLachlan, J. A. Peters, O. Tabares, G. Smies. 2023. Ethics in ecological forecasting: a case-based learning set. Teaching Issues and Experiments in Ecology. 19(13). https://doi.org/10.25334/5D99-Y019

Lewis, A. S. L., G. O’Malley, G. K. Palissery, A. Hensley, C. López Lloreda, C. Perez, E. K. Bueren. 2023. Flipped Science Fair invites children to judge graduate student posters through a university-community partnership. Journal of STEM Outreach. 6(1), 1–12. https://doi.org/10.15695/jstem/v6i1.14

Thomas, R.Q., C. Boettiger, C.C. Carey, M.C. Dietze, L.R. Johnson, M.A. Kenney, J.S. Mclachlan, J.A. Peters, E.R. Sokol, J.F. Weltzin, A. Willson, W.M. Woelmer, and Challenge Contributors. 2023. The NEON Ecological Forecasting Challenge. Frontiers in Ecology and the Environment. 21(3), 112–113. https://doi.org/10.1002/fee.2616

Woelmer, W. M., A. G. Hounshell, M. E. Lofton, H. L. Wander, A. S. L. Lewis, D. Scott, C. C. Carey. 2023. The importance of time and space in biogeochemical heterogeneity and processing along the reservoir ecosystem continuum. Aquatic Sciences. 85(2), 66. https://doi.org/10.1007/s00027-023-00959-7

2022

Lewis, A. S. L., W. M. Woelmer, H. L. Wander, D. W. Howard, J. W. Smith, R. P. McClure, M. E. Lofton, N. W. Hammond, R. S. Corrigan, R. Q. Thomas, C. C. Carey. 2022. Increased adoption of best practices in ecological forecasting enables comparisons of forecastability across systems. Ecological Applications. 32(2), e02500. https://doi.org/10.1002/eap.2500

Jane, S., J. L. Mincer, M. P. Lau, A. S. L. Lewis, J. T. Stetler, K. C. Rose. 2022. Longer duration of seasonal stratification contributes to widespread increases in lake hypoxia and anoxia. Global Change Biology. 29(4), 1009–1023. https://doi.org/10.1111/gcb.16525

Lofton, M. E., D. W. Howard, R. P. McClure, H. L. Wander, W. M. Woelmer, A. G. Hounshell, A. S. L. Lewis, C. C. Carey. 2022. Experimental thermocline deepening alters vertical distribution and community structure of phytoplankton in a four-year whole-reservoir manipulation. Freshwater Biology. 67(11), 1903–1924. https://doi.org/10.1111/fwb.13983

Carey C. C., P. C. Hanson, R. Q. Thomas, A. B. Gerling, A. Hounshell, A. S. L. Lewis, M. E. Lofton, R. P. McClure, H. L. Wander, W. M. Woelmer, B. R. Niederlehner, M. E. Schreiber. 2022. Anoxia decreases the magnitude of the carbon, nitrogen, and phosphorus sink in freshwaters. Global Change Biology. 28(16), 4861–4881. https://doi.org/10.1111/gcb.16228

2021

Carey, C. C., W. M. Woelmer, M. E. Lofton, R. J. Figueiredo, B. J. Bookout, R. S. Corrigan, V. Daneshmand, A. G. Hounshell, D. W. Howard, A. S. L. Lewis, R. P. McClure, H. L. Wander, N. K. Ward, R. Q. Thomas. 2021. Advancing lake and reservoir water quality management with near-term, iterative ecological forecasting. Inland Waters. 12(1), 107–120. https://doi.org/10.1080/20442041.2020.1816421

Woelmer, W. M., L. M. Bradley, L. T. Haber, D. H. Klinges, A. S. L. Lewis, E. Mohr, C. L. Torrens, K. I. Wheeler, A. M. Willson. 2021. 10 Simple Rules for training yourself in an emerging field. PLOS Computational Biology. 17(10), e1009440. https://doi.org/10.1371/journal.pcbi.1009440

2020

Lewis, A. S. L., B. S. Kim, H. L. Edwards, H. L. Wander, C. M. Garfield, H. E. Murphy, N. D. Poulin, S. D. Princiotta, K. C. Rose, A. E. Taylor, K. C. Weathers, C. R. Wigdahl-Perry, K. Yokota, D. C. Richardson, D. A. Bruesewitz. 2020. Prevalence of nitrogen and phosphorus colimitation of freshwater phytoplankton explained by nitrogen deposition and lake characteristics across northeastern United States. Inland waters. 10(1), 42–50. https://doi.org/10.1080/20442041.2019.1664233

2018

Frassl, M. A, D. P. Hamilton, B. A. Denfeld, E. de Eyto, S. E. Hampton, P. S. Keller, S. Sharma, A. S. L. Lewis, G. A. Weyhenmeyer, C. M. O’Reilly, M. E. Lofton, N. Catalán. 2018. Ten simple rules for collaboratively writing a multi-authored paper. PLOS Comp. Bio. 14(11), e1006508. https://doi.org/10.1371/journal.pcbi.1006508

2017

Lewis, S. E., J. J. Piatt., A. S. L. Lewis. 2017. Impact of a diet of native or non-native leaves on an amphipod Gammarus pseudolimnaeus. Freshwater Science. 36(4), 739–749. https://doi.org/10.1086/694855